Research Interests

Senay's research interests include biomedical text/data mining, Natural Language Processing (NLP), and Next Generation Sequencing (NGS) data analysis.

Scientific and Professional Membership

  • ​International Society of Computational Biology (ISCB) (2010-present).

KAUST Affiliations

  • Bio-Ontology Research Group (BORG).​
  • Computational Bioscience Research Center (CBRC).
  • Computer, Electrical, and Mathematical Sciences and Engineering (CEMSE).

Education Profile

  • Ph.D., Computer Engineering, Eastern Mediterranean University, Cyprus, 2012.
  • M.Sc., Computer Engineering, Eastern Mediterranean University, Cyprus, 2005.
  • B. Sc., Computer Engineering, Eastern Mediterranean University, Cyprus, 2003.

Professional Memberships

  • ​2017 -present: Research Scientist, KAUST, Thuwal, Saudi Arabia.
  • 2012-2017: Text Mining Specialist, European Bioinformatics Institute, Cambridge, United Kingdom.
  • 2012-2012: Postdoctoral Fellow, European Bioinformatics Institute, Cambridge, United Kingdom.
  • 2010-2012: Pre-doctoral research fellow, European Bioinformatics Institute, Cambridge, United Kingdom.
  • 2003-2010: Research Assistant, Eastern Mediterranean University, Cyprus.

Awards and Distinctions

  • ​Travel fellowship award, partly sponsored by the K.U.Leuven SymBioSys Center for Computational Systems Biology and the  BioMaGNet Network on Bioinformatics and Systems Biology (BelSpo-IAP), 2010.
  • Eastern Mediterranean University, Cyprus, scholarship for Ph.D. study (2009-2010).
  • Ministry of Education and Culture, Cyprus, scholarship for Ph.D. study (2009).
  • Eastern Mediterranean University, Cyprus, scholarship for Ph.D. study (2005-Spring 2008).
  • Eastern Mediterranean University, Cyprus, scholarship for MSc study (2003-2005).
  • Ministry of Education and Culture, Cyprus, annual grants for academic achievements in BSc study (1999-2003).
  • Eastern Mediterranean University, Cyprus, scholarship for BSc study (1999-2003).

Selected Publications

Kafkas, Ş., Sarntivijai, S., & Hoehndorf, R. (2017). Usage of cell nomenclature in biomedical literature. BMC Bioinformatics, 18(S17). doi:10.1186/s12859-017-1978-0