biodiversity

Statistical models for studying biodiversity: challenges and contributions

Antik Chakraborty, Postdoc, Department of Statistical Science, Duke University

Feb 7, 16:00 - 17:00

KAUST

A healthy ecosystem is essential to our well being and to ensure that we need a better understanding of the life or biodiversity around us. In the first part of this talk, I will introduce how modern technology is being used to collect data on biodiversity across space and time. These data come in complex forms such as DNA sequences, high-dimensional binary vectors, sound signals, etc. I will briefly touch upon the statistical challenges involved in making sense of these data. In the second part, I will elaborate on a project motivated by studying temporal patterns in bird vocalizations. I will introduce a new class of semiparametric latent variable models for long memory discretized event data. The proposed class of FRActional Probit (FRAP) models are based on the thresholding of a latent process consisting of an additive expansion of a smooth Gaussian process with a fractional Brownian motion. I will describe a Bayesian approach to inference using Markov chain Monte Carlo. Results from applying the model on Amazon bird vocalization data will be presented which provide substantial evidence for self-similarity and non-Markovian/Poisson dynamics. A hierarchical extension of the proposed model to accommodate vocalizations of multiple birds at the same time will also be discussed.