PhD Dissertation Defense | CBRC | Computational Bioscience Research Center

Interpretable Learning on Heterogeneous Graphs

Qiang Yang

Tuesday, November 07, 15:00

- 17:00

B3, L5, R5220

PhD Dissertation Defense

Prioritizing Causative Genomic Variants by Integrating Molecular and Functional Annotations from Multiple Biomedical Ontologies

Azza Althagafi

Thursday, July 20, 13:00

- 17:00

Building 2, Level 5, Room 5220

PhD Dissertation Defense

Ontology design patterns and methods for integrating phenotype ontologies

Sarah Alghamdi

Thursday, July 20, 09:00

- 10:00

Building 3, Level 5, Room 5209.

PhD Dissertation Defense

Drug Repositioning through the Development of Diverse Computational Methods using Machine Learning, Deep Learning, and Graph Mining

Maha Thafar

Thursday, June 30, 08:30

- 10:30

KAUST

PhD Dissertation Defense

To Encourage or to Restrict: the Label Dependency in Multi-Label Learning

Zhuo Yang

Wednesday, March 30, 17:30

- 19:30

KAUST

PhD Dissertation Defense

Omics-based Metastasis Prediction using Machine Learning and Deep Learning

Somayah Albaradei

Wednesday, March 30, 14:00

- 15:00

KAUST

PhD Dissertation Defense

Predicting Single Gene Loss of Function Phenotypes

Maxat Kulmanov

Monday, April 06, 19:30

- 21:30

KAUST

PhD Dissertation Defense

Novel computational methods for promoter identification and analysis

Ramzan Umarov

Sunday, February 16, 16:00

- 18:00

Building 2, Level 5, Room 5209

PhD Dissertation Defense

Machine Learning Models for Context Aware Recommendation Systems

Monday, November 04, 10:00

- 11:00

Building 3, Level 5 , Room 5209

PhD Dissertation Defense

KAUST CBRC BESE B CSG PhD Defense Dissertation Amani Almaabadi

Development of a pipeline for High Throughput Screening of Functional Metagenomic Library in Search for Novel Lipolytic Enzymes

Tuesday, July 30, 13:00

- 15:00

Building 3, Level 5, Room 5209

PhD Dissertation Defense

Computational Analysis of Transcriptional Regulation after Single and Multiple Drug Administration.

Trisevgeni Rapakoulia

Wednesday, July 17, 10:00

- 12:00

Building 3, Level 5, Room 5209

PhD Dissertation Defense

Characterization of Red Sea Cyanobacteria Aimed for Cell Factory Applications in Saudi Arabia: Synechococcus sp. RSCCF101.

Yi Mei Ng

Thursday, April 04, 14:00

- 16:00

Buildng 3 Level 5 Room 5220

PhD Dissertation Defense

Characterization of microbiologically influenced corrosion in pipelines by using metagenomics

Sunday, March 31, 14:00

- 16:00

B3 Level 5 Room 5209

PhD Dissertation Defense

Promoters identification and analysis

Ramzan Umarov

Thursday, March 07, 16:00

- 18:00

Buildng 1 Level 2 Room2202

PhD Dissertation Defense

Comparative metabolic modeling and analysis of human pathogens

Monday, March 04, 16:00

- 18:00

Building 3, Level 5, Room 5209

PhD Dissertation Defense

KAUST CEMSE CS PhD Defense Imene Boudellioua

Semantic Prioritization of Novel Causative Genomic Variants in Mendelian and Oligogenic Diseases

Imane Boudellioua

Tuesday, February 05, 14:00

- 17:00

Building 9, Room 4223

PhD Dissertation Defense

Contributions to Computational Methods for Association Extraction from Biomedical Data: Applications to Text Mining and In Silico Toxicology

Thursday, November 01, 11:00

- 13:00

Building 2, Level 5, room 5220

PhD Dissertation Defense

Towards rational design of biosynthesis pathways

Meshari Alazmi

Wednesday, October 24, 17:00

- 18:30

Building3, Room 5209

PhD Dissertation Defense

Similarity Algorithms by Anas Ismail

Thursday, August 02, 09:00

- 11:00

Building 3, Room 5209

PhD Dissertation Defense

KAUST PSE CBRC CBE PhD Defense Ghofran Othoum

Genome-scale Evaluation of the Biotechnological Potential of Red Sea Bacilli Strains by Ghofran Othoum, PhD Student

Monday, February 05, 11:00

- 12:30

Building 2, Level 5, Room 5220

PhD Dissertation Defense

KAUST CEMSE CBRC CS PhD Defense Rawan Olayan

Novel Computational Methods to Predict Drug–target Interactions Using Graph Mining and Machine Learning Approaches

Monday, December 11, 10:00

- 12:00

Building 3, Level 5, Room 5220

PhD Dissertation Defense

KAUST CEMSE CS Sensors PhD Defense Manal Kalkatawi

Contributions to In Silico Genome Annotation

Thursday, November 09, 10:00

- 13:00

Building 3, Level 5, Room 5209

PhD Dissertation Defense

Mining Genome-Scale Growth Phenotype Data through Constant-Column Biclustering

Majed Alzahrani

Wednesday, May 17, 15:00

- 17:00

Building 3, Level 5, Room 5209

PhD Dissertation Defense

KAUST CEMSE CS PhD Defense Arturo Magana Mora

Genetic Algorithms for Optimization of Machine-learning Models and their Applications in Bioinformatics

Monday, April 10, 13:00

- 15:00

Building 3, Level 5, Room 5209

PhD Dissertation Defense

Novel Computational Methods that Facilitate Development of Cyanofactories for Free Fatty Acid Production by Olaa Motwalli

Olaa A. Motwalli

Sunday, April 09, 16:00

- 17:00

Building 3, Level 5, Room 5209

PhD Dissertation Defense

Novel Data Mining Methods for Virtual Screening of Biological Active Chemical Compounds by Othman Soufan

Othman Soufan

Wednesday, November 16, 14:00

- 15:00

Lecture Hall 2, Building 9

PhD Dissertation Defense

Interpretable Learning on Heterogeneous Graphs

Prioritizing Causative Genomic Variants by Integrating Molecular and Functional Annotations from Multiple Biomedical Ontologies

Ontology design patterns and methods for integrating phenotype ontologies

Drug Repositioning through the Development of Diverse Computational Methods using Machine Learning, Deep Learning, and Graph Mining

To Encourage or to Restrict: the Label Dependency in Multi-Label Learning

Omics-based Metastasis Prediction using Machine Learning and Deep Learning

Predicting Single Gene Loss of Function Phenotypes

Novel computational methods for promoter identification and analysis

Machine Learning Models for Context Aware Recommendation Systems

Development of a pipeline for High Throughput Screening of Functional Metagenomic Library in Search for Novel Lipolytic Enzymes

Computational Analysis of Transcriptional Regulation after Single and Multiple Drug Administration.

Characterization of Red Sea Cyanobacteria Aimed for Cell Factory Applications in Saudi Arabia: Synechococcus sp. RSCCF101.

Characterization of microbiologically influenced corrosion in pipelines by using metagenomics

Promoters identification and analysis

Comparative metabolic modeling and analysis of human pathogens

Semantic Prioritization of Novel Causative Genomic Variants in Mendelian and Oligogenic Diseases

Contributions to Computational Methods for Association Extraction from Biomedical Data: Applications to Text Mining and In Silico Toxicology

Towards rational design of biosynthesis pathways

Similarity Algorithms by Anas Ismail

Genome-scale Evaluation of the Biotechnological Potential of Red Sea Bacilli Strains by Ghofran Othoum, PhD Student

Novel Computational Methods to Predict Drug–target Interactions Using Graph Mining and Machine Learning Approaches

Contributions to In Silico Genome Annotation

Mining Genome-Scale Growth Phenotype Data through Constant-Column Biclustering

Genetic Algorithms for Optimization of Machine-learning Models and their Applications in Bioinformatics

Novel Computational Methods that Facilitate Development of Cyanofactories for Free Fatty Acid Production by Olaa Motwalli

Novel Data Mining Methods for Virtual Screening of Biological Active Chemical Compounds by Othman Soufan

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