KAUST CEMSE CS BORG Robert Hoehndorf

Robert Hoehndorf

Associate Professor, Computer Science
Professors
KAUST CEMSE CS CBRC SFB Xin Gao

Xin Gao

Acting Associate Director, Computational Bioscience Research Center
Professors
Katsuhiko Mineta

Katsuhiko Mineta

Principal Research Scientist, Comparative Genomics and Genetics
Research Scientists
Magbubah Essak

Magbubah Essack

Research Scientist, Knowledge Mining Lab
Research Scientists
KAUST CEMSE CS BORG Senay Kafkas

Senay Kafkas

Research Scientist, Bio-Ontology Research Group
Research Scientists
KAUST CEMSE CBRC Bin Zhang

Bin Zhang

Postdoctoral Fellow, Computational Bioscience Research Center
Postdoctoral Fellows
KAUST CEMSE CBRC BORG CS Maxat Kulmanov.jpg

Maxat Kulmanov

Research Scientist, Bio-Ontology Research Group
Postdoctoral Fellows
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Reshmi Ramakrishnan

Postdoctoral Research Fellow, Structural Biology and Engineering
Postdoctoral Fellows
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Abdullah Aldehaiman

PhD Student, Bioscience
Students
KAUST CBRC CGG Ayman farran Masters student

Ayman Farran

MS Student, Comparative Genomics and Genetics
Students
KAUST CEMSE CS CBRC SFB Gian Marco Messa

Gian Marco Messa

PhD Student, Computer Science
Students
KAUST CEMSE CBRC SFB Haoyang Li

Haoyang Li

PhD Student, Computer Science
Students
CEMSE BESE CBRC STRUBE MS Student Karla Angélica Peña Guerra

Karla Angélica Peña Guerra

MS Student, Structural Biology and Engineering
Students
CEMSE BESE CBRC STRUBE Kelly Cardona Londoño P.hD

Kelly J. Cardona Londoño

PhD Student, Structural Biology and Engineering
Students
KAUST CBRC CEMSE BORG CS Kexin Niu Student

Kexin Niu

MS/PhD Student, Bioscience
Students
Maha Thafar

Maha Thafar

PhD Student, Computer Science
Students
KAUST CEMSE CBRC BORG CS Nurul Muttakin master student .JPG

MD Nurul Muttakin

MS/PhD Student, Computer Science
Students
Rund Tawfiq Masters Student (Gojobori Group)

Rund Tawfiq

PhD Student, Bio-Ontology Research Group
Students
KAUST CEMSE CS BORG Sara Althubaiti

Sara Althubaiti

PhD Student, Computer Science
Students
KAUST CEMSE CBRC BORG MS Student Shahad Qatan.JPG

Shahad Qathan

MS Student, Computer Science
Students
KAUST CEMSE CS SFB Somayah Albaradei

Somayah Albaradei

PhD Student, Computer Science
Students
KAUST CEMSE CS SFB Wenkai Han

Wenkai Han

PhD Student, Computer Science
Students
KAUST CEMSE CS SFB Xiaopeng Xu

Xiaopeng Xu

PhD Student, Computer Science
Students
Yang Liu

Yang Liu

PhD Student, Computer Science
Students
KAUST CEMSE CS SFB Yongkang Long

Yongkang Long

PhD Student, Computer Science
Students
KAUST CEMSE CS SFB Zhongxiao Li

Zhongxiao Li

PhD Student, Computer Science
Students
KAUST CEMSE CS CBRC PhD Degree Othman Soufan

Othman Soufan

PhD Degree, Computer Science
Alumni
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Siqing Hou

MS Degree, Computer Science
Alumni
KAUST CEMSE CS SFB Trisevgeni Rapakoulia

Trisevgeni Rapakoulia

PhD Degree, Computer Science
Alumni
KAUST CEMSE CS CBRC Vasiliki kordopati

Vasiliki Kordopati

Master Degree, Computer Science
Alumni
KAUST CEMSE CS SFB Yu Li

Yu Li

PhD Student, Computer Science
Alumni
KAUST CEMSE BORG Abdullah Muhammad Kamal

Abdullah Muhammad Kamal

Visiting Student, Computer Science
Former Members
KAUST CEMSE CS BORG Luke Slater

Luke Slater

PhD Student, Computer Science
Former Members
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Peng Yang

Postdoctoral Research Fellow, Structural and Functional Bioinformatics Group
Former Members
KAUST CEMSE CS SFB Renmin Han

Renmin Han

Postdoctoral Research Fellow, Structural and Functional Bioinformatics Group
Former Members
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Sheng Wang

Research Scientist, Structural and Functional Bioinformatics Group
Former Members
KAUST CEMSE BORG Tilman Hinnerichs

Tilman Hinnerichs

Visiting Student, Bio-Ontology Research Group
Former Members
Boris Jankovic

Boris Jankovic

Senior Computational Scientist, Knowledge Mining Lab
Computational Specialists
CBRC Seminar Katsu
Population genomics of indigenous inhabitants in Arabian Peninsula
Katsuhiko Mineta
Monday, April 11, 11:00
- 12:00
https://kaust.zoom.us/j/95586142868
Seminar
KAUST CEMSE CS PhD Dissertation Defense Somayah Albaradei
Omics-based Metastasis Prediction using Machine Learning and Deep Learning
Somayah Albaradei
Wednesday, March 30, 14:00
- 15:00
https://kaust.zoom.us/j/98007745127
PhD Dissertation Defense
KAUST CEMSE CS Public Colloquium Robert Hohndorf Knowledge based methods in life sciences
Knowledge-based methods in life sciences
Robert Hoehndorf
Tuesday, March 03, 10:00
- 11:30
Building 9, Level 2, Hall 2, Room 2325
Public Colloquium
KAUST CEMSE CS Graduate Seminar Xin Gao zero in on computational challenges in nanopore sequencing
Zero in on computational challenges in Nanopore sequencing
Xin Gao
Monday, September 02, 12:00
- 13:00
Building 9, Level 2, Hall 1
Graduate Seminar
CBRC hosts the Saudi Society of Medical Genetics (SSMG) Conference 2019
CBRC hosts the Saudi Society of Medical Genetics (SSMG) Conference 2019
Takashi Gojobori
Dr. Saleh AlGhamdi, The Saudi Society of Medical Genetics (SSMG)
Monday, April 15, 08:00
- 17:00
Building 19, Hall 1 & 2
Scientific Conference
AI for Genomics and Health
AI4GH Seminar Series - Towards Rational Design of Biosynthesis Pathways
Meshari Alazmi
Sunday, November 11, 12:00
- 13:00
Building 2 Room 5220
Seminar
AI for Genomics and Health
AI4GH Seminar Series - Towards Rational Design of Biosynthesis Pathways
Meshari Alazmi
Sunday, November 11, 12:00
- 13:00
B2, Room 5220
Seminar
KAUST CEMSE CS SEMINAR Trisevgeni Rapakoulia
AI4GH Seminar Series - Genome-scale Regression Analysis Reveals a Linear Relationship for Promoters and Enhancers After Combinatorial Drug Treatment
Trisevgeni Rapakoulia
Wednesday, November 07, 12:00
- 13:00
Building 2 Room 5220
Seminar
KAUST CEMSE CS MS Defense Sara Althubaiti.jpg
Variant Prioritization in Cancer: Understanding and Prediction of Cancer Driver Genes and Mutations
Sara Althubaiti
Monday, November 05, 10:30
- 12:30
Building 3, Room 5209
Master Thesis Defense
KAUST CEMSE CS PhD Defense Arwa Raies
Contributions to Computational Methods for Association Extraction from Biomedical Data: Applications to Text Mining and In Silico Toxicology
Thursday, November 01, 11:00
- 13:00
Building 2, Level 5, room 5220
PhD Dissertation Defense
KAUST Campus Beacon
VSIM: Visualization and Simulation of Genomes for Premarital Testing
Azza Althagafi
Thursday, November 01, 08:00
- 10:00
Building 3, Level 5, Room 5209
Master Thesis Defense
KAUST CEMSE CS BORG Visualization and Simulation of Genomes
AI4GH Seminar Series - VSIM: Visualization and Simulation of Genomes for Premarital Testing
Azza Althagafi
Wednesday, October 31, 12:00
- 13:00
Building 2 Room 5220
Seminar
KAUST CEMSE CS PhD Defense Meshari Alazmi
Towards rational design of biosynthesis pathways
Meshari Alazmi
Wednesday, October 24, 17:00
- 18:30
Building3, Room 5209
PhD Dissertation Defense
KAUST CEMSE CS BORG Machine Learning with Biological Knowledge Graphs
AI4GH Seminar Series - Machine Learning with Biological Knowledge Graphs
Mona Alshahrani
Wednesday, October 24, 12:00
- 13:00
Building 2, Room 5220
Seminar
AI4GH Seminar Series Variants Prioritization in Cancer by Sara Althubaiti
AI4GH Seminar Series - Variant Prioritization in Cancer: Understanding and Prediction of Cancer Driver Genes and Mutations
Wednesday, October 17, 12:00
- 13:00
Building 2, Room 5220
Seminar
AI4GH SEMINAR SERIES CEMSE CS BORG Robert Hoehndorf
AI4GH Seminar Series| Artificial Intelligence for Genomics and Health: Introduction and Overview
Robert Hoehndorf
Wednesday, October 03, 12:00
- 13:00
Building 2, Room 5220
Seminar
KAUST CEMSE CS CBRC SFB Master Defense Siqing Hou
Neural Inductive Matrix Factorization for Predicting Disease-Gene Associations
Siqing Hou
Wednesday, April 18, 10:00
- 11:30
Building 3, Room 5208
Master Thesis Defense
KAUST CEMSE CBRC CS PhD Defense Rawan Olayan
Novel Computational Methods to Predict Drug–target Interactions Using Graph Mining and Machine Learning Approaches
Monday, December 11, 10:00
- 12:00
Building 3, Level 5, Room 5220
PhD Dissertation Defense
KAUST CEMSE CS Sensors PhD Defense Manal Kalkatawi
Contributions to In Silico Genome Annotation
Thursday, November 09, 10:00
- 13:00
Building 3, Level 5, Room 5209
PhD Dissertation Defense
KAUST CEMSE CBRC STAT Seminar Dr Zhi LIU
Testing for Equality of Distributions Using Empirical Likelihood Approach
Dr. Zhi LIU, Assistant Professor in Department of Mathematic of University of Macau, China
Wednesday, November 01, 14:00
- 15:00
Building 2, Level 5, Room 5209
Seminar
KAUST CEMSE CBRC Seminar Prof Dr William-Martin .jpg
Endosymbiotic Origin and Differential Loss of Eukaryotic Genes
Prof. Dr. William Martin, Institute of Molecular Evolution Heinrich-Heine-Universität Düsseldorf, Germany
Tuesday, May 23, 11:00
- 12:00
Building 3, Level 5, Room 5209
Seminar
KAUST CEMSE CS PhD Defense Arturo Magana Mora
Genetic Algorithms for Optimization of Machine-learning Models and their Applications in Bioinformatics
Monday, April 10, 13:00
- 15:00
Building 3, Level 5, Room 5209
PhD Dissertation Defense
KAUST Campus Beacon
Novel Computational Methods that Facilitate Development of Cyanofactories for Free Fatty Acid Production by Olaa Motwalli
Olaa A. Motwalli
Sunday, April 09, 16:00
- 17:00
Building 3, Level 5, Room 5209
PhD Dissertation Defense
KAUST CEMSE CBRC Workshop Python for Biologists
Advanced Python for Biologists
Sunday, March 19, 09:00
- 16:30
Building 9 - Level 2 - Room 2223
Workshop
KAUST CEMSE CBRC Seminar Prof Ying Wi
At the root, cancer is probably about fighting to maintain the intracellular pH stability：cancer research through data mining and modeling
Prof. Ying Xu, Georgia Research Alliance Eminent Scholar of Bioinformatics
Monday, March 06, 11:30
- 13:00
Building 4 - Level 5 - Room 5209
Seminar
KAUST CEMSE CBRC WASEDA AIST Joint Workshop Big Data Analysis and Single Cell
KAUST-AIST-WASEDA Joint Workshop
Wednesday, March 01, 13:30
- 15:15
Building 3, Level 5, Room 5220 (KCC side)
Workshop
KAUST CEMSE CBRC Seminar Dr Wei Chen
Evolution and Regulation of Gene Expression
Dr. Chen Wei, Chair professor, Department of Biology, Southern University of Science and Technology of China
Sunday, January 22, 11:30
- 12:30
Building 3, Level 5, Room 5220 (KCC side)
Seminar
KAUST alumnus named in Forbes' “30 Under 30 Asia list” – Class of 2022
2 weeks 6 days ago
Population genomics of indigenous inhabitants in Arabian Peninsula
1 month 3 weeks ago
CBRC's Alumni Dr.Tanvir Alam wins top researcher award in Qatar
2 months 2 weeks ago
Ph.D. Defense: Omics-based Metastasis Prediction using Machine Learning and Deep Learning by Somayah Albaradei
2 months 4 weeks ago
MS Thesis Defense: Rare variant collapsing analysis on UK Biobank by Yang Liu
3 months ago
FEBS Open Bio chat with Professor Takashi Gojobori
4 months 3 weeks ago
CBRC congratulates Aryam Alotaibi a SRSI student on winning the top paper Award
11 months 1 week ago
Xin Gao promoted to rank of professor
1 year 5 months ago
Talented KAUST Ph.D. student aims to revolutionize healthcare with machine learning
1 year 7 months ago
Robert Hoehndorf promoted to associate professor at KAUST
2 years ago
KAUST Assistant Professor Robert Hoehndorf gives a talk on " Artificial intelligence for Genomics and Health"
3 years 3 months ago
Sara Althubaiti defends her Master's thesis
3 years 7 months ago
Azza Althagafi defends her Master's thesis
3 years 8 months ago
Meshari Alazmi defends his Ph.D. thesis
3 years 8 months ago
Computing solutions for biological problems
3 years 8 months ago
Knowledge Mining Lab website is now online
3 years 8 months ago
Maxat Kulmanov defends his thesis proposal
3 years 11 months ago
Meshari Alazami defends his thesis proposal
4 years 1 month ago
Miriam Escarlet Diaz Galicia defends her master's thesis
4 years 1 month ago
Sarah Alghamdi defends her master's thesis
4 years 1 month ago
Siqing Hou defends his Master’s thesis
4 years 2 months ago
Alumni Feature: Abdullah Khamis
4 years 2 months ago
CBRC awarded three Center Partnership Funds
4 years 2 months ago
Class of 2017
4 years 6 months ago
Discussion on artificial intelligence in 2001: A Space Odyssey
4 years 8 months ago
Professor Zhi Liu gives a seminar on testing for equality of distributions
4 years 8 months ago
The Ph.D. journey
5 years 1 month ago
Student life: studying and working at the Computational Bioscience Research Center (KAUST)
5 years 1 month ago
Living and Working in KAUST as a VSRP or Visiting Student
5 years 2 months ago
Researching cancer through data mining and modeling
5 years 3 months ago
Japanese institutes hold joint workshop with CBRC
5 years 3 months ago
Swedish delegation visits KAUST
5 years 4 months ago
Professor Robert Hoehndorf's PhenomeNET method wins at Ontology matching workshop
5 years 8 months ago
​Science in Focus
5 years 9 months ago
CBRC Goes to Ofunato
5 years 10 months ago
​Join the CBRC through the VSRP
5 years 11 months ago
​Follow us on social media
5 years 11 months ago
​Prof. Xin Gao Promoted to Associate Professor
6 years ago
Python for Biologists Workshop
6 years 1 month ago
Prof. Vladimir Bajic, Guest Co-editor of the GBP special issue
6 years 9 months ago